SEQ Converter is a simple and very easy-to-use Java based application that allows you to convert Atari CyberPaint Sequence animations. You can use the software to convert your files into: · Amiga IFF ANIM video · Microsoft AVI video · Apple QuickTime video...
Splice Seq was created as a small, handy and user-friendly bioinformatic utility that allows all its users to study alternative splicing in next generation mRNA sequencing data. Splice Seq is written using Java and is available for all major platforms, including Windows, Mac OS X and Linux.
Chip-Seq Tool Set is a toolset that's been specially developed to help you analyze and compare ChIP-Seq data. The software includes the Sole-Search tool, GFF-Overlap tool and Location-Analysis tool. The Chip-Seq Tool Set was developed in the Java programming language and can run on multiple...
ALEXA-Seq is a method for using massively parallel paired-end transcriptome sequencing for 'alternative expression analysis'.
Batman-Seq: Basic Alignment Tool for MAny Nucleotides. A fast BWT-based short reads mapping tools which uses additional statistical method to model error profile of the sequencing experiment.
CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
CNV-WebStore is an integrated platform to analyse, store, visualise and interpret CopyNumber Variation data. Analysis is supported for Illumina data, all CNV-reports and raw data can be imported after third-party analysis. See Track-Wiki to Install
CNV calling software may produce false-positive calls due to imperfect source material. Direct inspection of the microarray data with the noise-free-cnv software helps to appreciate the quality of the data and to identify artificial calls.With noise-free-cnv it is possible to visualize individual...
The Trinity RNA-Seq Assembly project provides software solutions targeted to the reconstruction of full-length transcripts and alternatively spliced isoforms from Illumina RNA-Seq data.